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BaseInfo

ncRNA ID	novel_zma_miR13778
Species	Zea mays
Class	miRNA
Genome position	Chr2:27755813-27755865 [+]
Reference genome	RefGen_v4
Source	SRR1583941
Length	21
Mature sequence(if miRNA)	33 - CGGUGCUGAGGUUGAUGACCU - 53
Stem-loop(if miRNA)	--       -    CG  UG AGG  CU   GUCGUCA CCUC  GG  C   AG  U   ||||||| ||||  ||  |   ||   CAGUAGU GGAG  UC  G   UC  G UC       U    --  GU GCA  AA
Stem-loop sequence	GUCGUCACCUCCGGGUGCAGGAGCUUGAACUACGGUGCUGAGGUUGAUGACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542929.1	ncRNA:21   UCCAGUAGUUGGAGUCGUGGC   1   ||||||||||||||=|||||| targets:625   AGGUCAUCAACCUCGGCACCG   645 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109941719 (LOC109941719), mRNA	NA	coding protein	psRNATarget
XM_008645577.1	ncRNA:21   UCCAGUAGUUGGAGUCGUGGC   1   *|**|=||||||||||||||| targets:1148   CGCCCGUCAACCUCAGCACCG   1168 Target Full Sequence	3.0	PREDICTED: Zea mays anther-specific proline-rich protein APG (LOC100285073), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT042701.1	ncRNA:21   UCCAGUAGUUGGAGUCGUGGC   1   *|**|=||||||||||||||| targets:1116   CGCCCGUCAACCUCAGCACCG   1136 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0014E05 mRNA, complete cds	NA	coding protein	psRNATarget
EU970765.1	ncRNA:21   UCCAGUAGUUGGAGUCGUGGC   1   *|**|=||||||||||||||| targets:1180   CGCCCGUCAACCUCAGCACCG   1200 Target Full Sequence	3.0	Zea mays clone 350332 anther-specific proline-rich protein APG precursor, mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157968.1	ncRNA:21   UCCAGUAGUUGGAGUCGUGGC   1   *|**|=||||||||||||||| targets:1180   CGCCCGUCAACCUCAGCACCG   1200 Target Full Sequence	3.0	Zea mays anther-specific proline-rich protein APG (LOC100285073), mRNA	NA	coding protein	psRNATarget