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BaseInfo

ncRNA ID	novel_zma_miR13774
Species	Zea mays
Class	miRNA
Genome position	Chr6:90051416-90051528 [+]
Reference genome	RefGen_v4
Source	SRR1583942;SRR1583943
Length	24
Mature sequence(if miRNA)	1 - GUGCUCACCUAUACUCUUAGUCGU - 24
Stem-loop(if miRNA)	--                                             C   -  U U   GUGCUCACCUAUACUCUUAGUCGUGUUUUUUGCUCAGCUGUGUCC UCU GU C A   ||||||||||||||||||||||||||||||||||||||||||||| ||| || |   CACGAGUGGAUAUGGGAAUCAGCACAAAAAACGAGUCGACACGGG AGG CA G U CA                                             A   U  C A
Stem-loop sequence	GUGCUCACCUAUACUCUUAGUCGUGUUUUUUGCUCAGCUGUGUCCCUCUGUUCUAUAGCACUGGAAGGGCACAGCUGAGCAAAAAACACGACUAAGGGUAUAGGUGAGCACAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008667649.2	ncRNA:24   UGCUGAUUCUCAUAUCCACUCGUG   1   |||--||*||||||||||*||||| targets:906   ACG--UACGAGUAUAGGUAAGCAC   927 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100217218 (pco088212), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020547231.1	ncRNA:24   UGCUGAUUCUCAUAUCCACUCGUG   1   |||--||*||||||||||*||||| targets:907   ACG--UACGAGUAUAGGUAAGCAC   928 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100217218 (pco088212), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT038148.1	ncRNA:24   UGCUGAUUCUCAUAUCCACUCGUG   1   |||--||*||||||||||*||||| targets:1143   ACG--UACGAGUAUAGGUAAGCAC   1164 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0214G05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143575.1	ncRNA:24   UGCUGAUUCUCAUAUCCACUCGUG   1   |||--||*||||||||||*||||| targets:1143   ACG--UACGAGUAUAGGUAAGCAC   1164 Target Full Sequence	2.5	Zea mays uncharacterized LOC100217218 (pco088212), mRNA	NA	coding protein	psRNATarget
XM_008667643.2	ncRNA:24   UGCUGAUUCUCAUAUCCACUCGUG   1   |||--||*||||||||||*||||| targets:907   ACG--UACGAGUAUAGGUAAGCAC   928 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100217218 (pco088212), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008667658.2	ncRNA:24   UGCUGAUUCUCAUAUCCACUCGUG   1   |||--||*||||||||||*||||| targets:904   ACG--UACGAGUAUAGGUAAGCAC   925 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100217218 (pco088212), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008667637.2	ncRNA:24   UGCUGAUUCUCAUAUCCACUCGUG   1   |||--||*||||||||||*||||| targets:907   ACG--UACGAGUAUAGGUAAGCAC   928 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100217218 (pco088212), transcript variant X1, mRNA	NA	coding protein	psRNATarget