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BaseInfo

ncRNA ID osa-miRf10974-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CCACGAGGUCAUGGGUUCAA - NA
Stem-loop(if miRNA)       C   C                   CU     UCUUA
CUUUUA CCA GAGGUCAUGGGUUCAAGUC  CAUUC     A
|||||| ||| |||||||||||||||||||  |||||
GAGAAU GGU CUCCAGUACCCAAGUUCAG  GUAGG     U
      A   U                   AG     UUUUU
Stem-loop sequence CUUUUACCCACGAGGUCAUGGGUUCAAGUCCUCAUUCUCUUAAUUUUUUGGAUGGAGACUUGAACCCAUGACCUCUUGGAUAAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK060850.1
ncRNA:20   AACUUGGGUACUGGAGCACC   1
  ||||*||||||||||=||||
targets:1393   UUGAUCCCAUGACCUUGUGG   1412

2.5 Oryza sativa Japonica Group cDNA clone:001-034-E07, full insert sequence NA coding protein psRNATarget
AK066032.1
ncRNA:20   AACUUGGGUACUGGAGCACC   1
  ||||*||||||||||=||||
targets:1431   UUGAUCCCAUGACCUUGUGG   1450

2.5 Oryza sativa Japonica Group cDNA clone:J013046D12, full insert sequence NA coding protein psRNATarget
XM_015780687.1
ncRNA:20   AACUUGGGUACUGGAGCACC   1
  ||||*||||||||||=||||
targets:1560   UUGAUCCCAUGACCUUGUGG   1579

2.5 PREDICTED: Oryza sativa Japonica Group eukaryotic translation initiation factor 3 subunit M (LOC4334895), mRNA eukaryotic translation initiation factor 3 subunit M(LOC4334895) coding protein psRNATarget