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BaseInfo

ncRNA ID novel_zma_miR13762
Species Zea mays
Class miRNA
Genome position Chr7:148194398-148194487 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 67 - AGGGCGGACUGUCCGCGGCCUGGU - 90
Stem-loop(if miRNA) --A G            C G  UG U C   GCUA    --   U   U
   G GCGGACUGUCCG G CC  G G GCG    GGGC  UCC GCC G
   | |||||||||||| | ||  | | |||    ||||  ||| |||
   C CGCCUGGCAGGC C GG  C C CGC    CCUG  AGG CGG A
AUG G            - G  GU - -   ---A    GC   C   C
Stem-loop sequence AGGGCGGACUGUCCGCGGCCUGGUGCGCGGCUAGGGCUCCUGCCUGACGGCCGGACGGUCCACGCCCUGGGGCCGGACGGUCCGCGCGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539115.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1
  *||||||||||||||||||||||*
targets:2707   CCCAGGCCGCGGACAGUCCGCCCC   2730

1.0 PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA NA coding protein psRNATarget
NM_001196968.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1
  *=|||||||||||||||||||||*
targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287

1.0 Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA NA coding protein psRNATarget
BT088349.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1
  *=|||||||||||||||||||||*
targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287

1.0 Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds NA coding protein psRNATarget