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BaseInfo

ncRNA ID	novel_zma_miR13761
Species	Zea mays
Class	miRNA
Genome position	Chr7:160379753-160379803 [-]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	1 - AAGCUGGCUGUGGGGAAAAGUUGG - 24
Stem-loop(if miRNA)	--       UU   A  --      U   GGCUUUU  CUG AG  AGCUUU U   |||||||  ||| ||  |||||| U   UUGAAAA  GGU UC  UCGAAA G GG       GG   G  GG      A
Stem-loop sequence	GGCUUUUUUCUGAAGAGCUUUUUUGAAAAGCUGGCUGUGGGGAAAAGUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT019048.1	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   |||=|||||||||||||||||||| targets:124   CCAGCUUUUCCCCACAGCCAGCUU   147 Target Full Sequence	0.0	Zea mays clone Contig569.F mRNA sequence	NA	coding protein	psRNATarget
XM_008667434.2	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   |||=|||||||||||||||||||| targets:2397   CCAGCUUUUCCCCACAGCCAGCUU   2420 Target Full Sequence	0.0	PREDICTED: Zea mays putative nuclease HARBI1 (LOC103644234), mRNA	NA	coding protein	psRNATarget
XM_020545921.1	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   =||=|||||||||||||||||||| targets:2218   UCAGCUUUUCCCCACAGCCAGCUU   2241 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC109943094), mRNA	NA	coding protein	psRNATarget
EZ078358.1	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   =||||||*||=||||||||||||| targets:101   UCAACUUAUCUCCACAGCCAGCUU   124 Target Full Sequence	2.0	TSA: Zea mays contig13997, mRNA sequence	NA	coding protein	psRNATarget
XM_008658633.1	ncRNA:20   GAAAAG-GGGUGUCGGUCGAA   1   ||||||-|||||||||||||| targets:1   CUUUUCUCCCACAGCCAGCUU   21 Target Full Sequence	2.0	PREDICTED: Zea mays protein CLT1, chloroplastic (LOC103636274), mRNA	NA	coding protein	psRNATarget
EU963449.1	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   |||=*||*|||||||||||||*|| targets:721   CCAGAUUCUCCCCACAGCCAGAUU   744 Target Full Sequence	2.5	Zea mays clone 262668 mRNA sequence	NA	coding protein	psRNATarget
XM_008677133.2	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   |||=*||*|||||||||||||*|| targets:2298   CCAGAUUCUCCCCACAGCCAGAUU   2321 Target Full Sequence	2.5	PREDICTED: Zea mays phosphoglucomutase, chloroplastic (LOC103651489), mRNA	NA	coding protein	psRNATarget
XM_020545993.1	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   ||=|-||*|||||||||||||*|| targets:190   CCGA-UUCUCCCCACAGCCAGAUU   212 Target Full Sequence	2.5	PREDICTED: Zea mays short-chain dehydrogenase TIC 32, chloroplastic (LOC103641540), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008664880.2	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   ||=|-||*|||||||||||||*|| targets:440   CCGA-UUCUCCCCACAGCCAGAUU   462 Target Full Sequence	2.5	PREDICTED: Zea mays short-chain dehydrogenase TIC 32, chloroplastic (LOC103641540), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008664881.2	ncRNA:24   GGUUGAAAAGGGGUGUCGGUCGAA   1   ||=|-||*|||||||||||||*|| targets:444   CCGA-UUCUCCCCACAGCCAGAUU   466 Target Full Sequence	2.5	PREDICTED: Zea mays short-chain dehydrogenase TIC 32, chloroplastic (LOC103641540), transcript variant X2, mRNA	NA	coding protein	psRNATarget