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BaseInfo

ncRNA ID osa-miRf10972-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GGAGACUUGAACCCAUGACC - NA
Stem-loop(if miRNA)      GA                   U          -      ACACCAC
GGAUG  GACUUGAACCCAUGACCUC UGGGUAAGAG AAUAAG       C
|||||  ||||||||||||||||||| |||||||||| ||||||
CUUAC  CUGAACUUGGGUACUGGAG ACCCAUUUUC UUAUUC       A
     UC                   C          G      CCAUAUC
Stem-loop sequence GGAUGGAGACUUGAACCCAUGACCUCUUGGGUAAGAGAAUAAGACACCACCACUAUACCCUUAUUGCUUUUACCCACGAGGUCAUGGGUUCAAGUCCUCAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288739.1
ncRNA:20   CCAGUACCCAAGUUCAGAGG   1
  ||||||||||||||||||=*
targets:776   GGUCAUGGGUUCAAGUCUUG   795

2.5 Oryza sativa Japonica Group cDNA, clone: J090063N20, full insert sequence NA coding protein psRNATarget
XM_015759490.1
ncRNA:20   CCAGUACCCAAGUUCAGAGG   1
  |||||||||||||*||||||
targets:1129   GGUCAUGGGUUCACGUCUCC   1148

1.5 PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA3 (LOC9270182), mRNA putative disease resistance protein RGA3(LOC9270182) coding protein psRNATarget