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BaseInfo

ncRNA ID	novel_zma_miR13740
Species	Zea mays
Class	miRNA
Genome position	Chr6:7514433-7514539 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	1 - AUAUCUAAAGUUGCAAUCUUU - 21
Stem-loop(if miRNA)	--     A                     --   --     ACUUACAUGUGGGG   AGAUU CAACUUUAGAUAUAUACCAUU  GCU  AUCUC              U   ||||| |||||||||||||||||||||  |||  |||||              U   UCUAA GUUGAAAUCUAUAUAUGGUAA  UGA  UGUAC              A UU     C                     AC   GG     AGUAACUAAGUACA
Stem-loop sequence	AGAUUACAACUUUAGAUAUAUACCAUUGCUAUCUCACUUACAUGUGGGGUUAACAUGAAUCAAUGACAUGUGGAGUCAAAUGGUAUAUAUCUAAAGUUGCAAUCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008669273.2	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1135   AAAGAUUGCAACUUUAGAUAU   1155 Target Full Sequence	0.0	PREDICTED: Zea mays Phosphomannomutase (umc2246), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008669274.2	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1126   AAAGAUUGCAACUUUAGAUAU   1146 Target Full Sequence	0.0	PREDICTED: Zea mays Phosphomannomutase (umc2246), transcript variant X2, mRNA	NA	coding protein	psRNATarget
AY105630.1	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1100   AAAGAUUGCAACUUUAGAUAU   1120 Target Full Sequence	0.0	Zea mays PCO073836 mRNA sequence	NA	coding protein	psRNATarget
XM_008669275.2	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1108   AAAGAUUGCAACUUUAGAUAU   1128 Target Full Sequence	0.0	PREDICTED: Zea mays Phosphomannomutase (umc2246), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT085518.1	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1089   AAAGAUUGCAACUUUAGAUAU   1109 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0028K04 mRNA, complete cds	NA	coding protein	psRNATarget
EU965045.1	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1091   AAAGAUUGCAACUUUAGAUAU   1111 Target Full Sequence	0.0	Zea mays clone 283433 mRNA sequence	NA	coding protein	psRNATarget
BT039634.1	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1103   AAAGAUUGCAACUUUAGAUAU   1123 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0035I13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147320.1	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1103   AAAGAUUGCAACUUUAGAUAU   1123 Target Full Sequence	0.0	Zea mays Phosphomannomutase (umc2246), mRNA	NA	coding protein	psRNATarget
BT039627.1	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1097   AAAGAUUGCAACUUUAGAUAU   1117 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0035C20 mRNA, complete cds	NA	coding protein	psRNATarget
BT063220.1	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   ||||||||||||||||||||| targets:1019   AAAGAUUGCAACUUUAGAUAU   1039 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0039G24 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656662.2	ncRNA:21   UUUCUAACGUUGAAAUCUAUA   1   |||||||*||||||||||||| targets:2160   AAAGAUUACAACUUUAGAUAU   2180 Target Full Sequence	1.0	PREDICTED: Zea mays protein binding protein (LOC100280668), transcript variant X1, mRNA	NA	coding protein	psRNATarget