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BaseInfo

ncRNA ID	ath-miR781b
Species	Arabidopsis thaliana
Class	miRNA
Genome position	chr1:7423521-7423607 [-]
Reference genome	TAIR10
Source	miRBase
Length	21
Mature sequence(if miRNA)	65 - UUAGAGUUUUCUGGAUACUUA - 85
Stem-loop(if miRNA)	AU                     AA     AUAU      AG   UUAGAGUUUUCUGGAUACUUA  AGUUA    CGAAGA  C   |||||||||||||||||||||  |||||    ||||||  C   AAUCUCAAAAGACCUAUGAAU  UCAAU    GUUUCU  C UU                     AA     GAUU      CU
Stem-loop sequence	AUUUAGAGUUUUCUGGAUACUUAAAAGUUAAUAUCGAAGAAGCCCUCUCUUUGUUAGUAACUAAUAAGUAUCCAGAAAACUCUAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY086502.1	ncRNA:21   AUUCAUAGGUCUUUUGAGAUU   1   **||||||||||||||||||= targets:154   CUAGUAUCCAGAAAACUCUAG   174 Target Full Sequence	1.0	Arabidopsis thaliana clone 25501 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_122255.6	ncRNA:21   AUUCAUAGGUCUUUUGAGAUU   1   **||||||||||||||||||= targets:1237   CUAGUAUCCAGAAAACUCUAG   1257 Target Full Sequence	1.0	Arabidopsis thaliana SWIB/MDM2, Plus-3 and GYF domain-containing protein mRNA	SWIB/MDM2, Plus-3 and GYF domain-containing protein(AT5G23480)	coding protein	psRNATarget
NM_001343809.1	ncRNA:21   AUUCAUAGGUCUUUUGAGAUU   1   **||||||||||||||||||= targets:1330   CUAGUAUCCAGAAAACUCUAG   1350 Target Full Sequence	1.0	Arabidopsis thaliana SWIB/MDM2, Plus-3 and GYF domain-containing protein partial mRNA	SWIB/MDM2, Plus-3 and GYF domain-containing protein(AT5G23480)	coding protein	psRNATarget
NM_001343808.1	ncRNA:21   AUUCAUAGGUCUUUUGAGAUU   1   **||||||||||||||||||= targets:1370   CUAGUAUCCAGAAAACUCUAG   1390 Target Full Sequence	1.0	Arabidopsis thaliana SWIB/MDM2, Plus-3 and GYF domain-containing protein mRNA	SWIB/MDM2, Plus-3 and GYF domain-containing protein(AT5G23480)	coding protein	psRNATarget
NM_001343807.1	ncRNA:21   AUUCAUAGGUCUUUUGAGAUU   1   **||||||||||||||||||= targets:1576   CUAGUAUCCAGAAAACUCUAG   1596 Target Full Sequence	1.0	Arabidopsis thaliana SWIB/MDM2, Plus-3 and GYF domain-containing protein mRNA	SWIB/MDM2, Plus-3 and GYF domain-containing protein(AT5G23480)	coding protein	psRNATarget
NM_001343806.1	ncRNA:21   AUUCAUAGGUCUUUUGAGAUU   1   **||||||||||||||||||= targets:1576   CUAGUAUCCAGAAAACUCUAG   1596 Target Full Sequence	1.0	Arabidopsis thaliana SWIB/MDM2, Plus-3 and GYF domain-containing protein mRNA	SWIB/MDM2, Plus-3 and GYF domain-containing protein(AT5G23480)	coding protein	psRNATarget
NM_001343805.1	ncRNA:21   AUUCAUAGGUCUUUUGAGAUU   1   **||||||||||||||||||= targets:1689   CUAGUAUCCAGAAAACUCUAG   1709 Target Full Sequence	1.0	Arabidopsis thaliana SWIB/MDM2, Plus-3 and GYF domain-containing protein mRNA	SWIB/MDM2, Plus-3 and GYF domain-containing protein(AT5G23480)	coding protein	psRNATarget

Reference

1	PMID:21940835 "High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012).