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BaseInfo

ncRNA ID novel_zma_miR13719
Species Zea mays
Class miRNA
Genome position Chr5:54301873-54302050 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - ACGGCUGGCUCUAGGAAGUUAGGU - 24
Stem-loop(if miRNA) --     UG   C          G    CAUCC   C  AA C      --AAU             C  CU    C          GCUG
  ACGGC  GCU UAGGAAGUUA GUUU     GUU AC  G CAAUAG     AGCUAACUUCCUA GG  GGCU UAGGAAGUUA    C
  |||||  ||| |||||||||| ||||     ||| ||  | ||||||     ||||||||||||| ||  |||| ||||||||||
  UGUCG  CGG AUCCUUCAAU UAAA     CAA UG  C GUUGUC     UCGAUUGAAGGAU UC  CCGG AUCCUUCAAU    C
GA     GU   C          A    --AAC   A  AC A      GAUUU             C  CU    C          AAAC
Stem-loop sequence ACGGCUGGCUCUAGGAAGUUAGGUUUCAUCCGUUCACAAGCCAAUAGAAUAGCUAACUUCCUACGGCUGGCUCUAGGAAGUUAGCUGCCCAAAUAACUUCCUACGGCCUCCUCUAGGAAGUUAGCUUUUAGCUGUUGACCAGUAAACCAAAAAUAUAACUUCCUACGGCUGGCUGUAG