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BaseInfo

ncRNA ID novel_zma_miR13714
Species Zea mays
Class miRNA
Genome position Chr5:28415812-28415876 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - AAAAUUAUUUAGGACUAGGUGUAA - 24
Stem-loop(if miRNA) -AC  G       -   -     A  U   GCA
   UA UUAGUCC AAA GAUUU UG UGA   A
   || ||||||| ||| ||||| || |||   U
   GU GAUCAGG UUU UUAAA AC ACU   U
AAU  G       A   A     -  C   AAC
Stem-loop sequence ACUAGUUAGUCCAAAGAUUUAUGUUGAGCAAUUCAAUCACCAAAAUUAUUUAGGACUAGGUGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084686.1
ncRNA:24   AAUGUGGAUCA-GGAUUUAUUAAAA   1
  |||||||||||-|||||||||||||
targets:1906   UUACACCUAGUUCCUAAAUAAUUUU   1930

3.0 Zea mays full-length cDNA clone ZM_BFb0158H14 mRNA, complete cds NA coding protein psRNATarget
EU972700.1
ncRNA:24   AAUGUGGAUCA-GGAUUUAUUAAAA   1
  |||||||||||-|||||||||||||
targets:1066   UUACACCUAGUUCCUAAAUAAUUUU   1090

3.0 Zea mays clone 386260 mRNA sequence NA coding protein psRNATarget