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BaseInfo

ncRNA ID novel_zma_miR13712
Species Zea mays
Class miRNA
Genome position Chr5:33514804-33514884 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 21
Mature sequence(if miRNA) 61 - UGAGAGCAAGGAUACUGGAGG - 81
Stem-loop(if miRNA) --               UG    AAU     -UA  A   G
  UGAGAGCAAGGAUAC  GAGG   UUGAA   GC AGA A
  |||||||||||||||  ||||   |||||   || |||
  ACUCUCGUUCCUAUG  CUCC   AACUU   CG UUU A
AA               GU    CCU     UCC  A   U
Stem-loop sequence UGAGAGCAAGGAUACUGGAGGAAUUUGAAUAGCAAGAGAAUUUUAGCCCUUUCAAUCCCCUCUGGUAUCCUUGCUCUCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110186.1
ncRNA:21   GGAGGUCAUAGGAACGAGAGU   1
  =||||=|||||||||||||||
targets:952   UCUCCGGUAUCCUUGCUCUCA   972

1.0 Zea mays CL142_1 mRNA sequence NA coding protein psRNATarget
EU949300.1
ncRNA:21   GGAGGUCAUAGGAACGAGAGU   1
  =||||=|||||||||||||||
targets:952   UCUCCGGUAUCCUUGCUCUCA   972

1.0 Zea mays clone 400899 mRNA sequence NA coding protein psRNATarget