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BaseInfo

ncRNA ID	novel_zma_miR13711
Species	Zea mays
Class	miRNA
Genome position	Chr5:38609433-38609657 [-]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	1 - AUCCCUUUGAGCACCAGAUACGUU - 24
Stem-loop(if miRNA)	--                        U       UA    C            CU        C       ---  A        UA     AC           C     AGGG   CGUAUCUGGUGCUCAAAGGGGUAC GUGCUCA  UGCA AUUUUAAAUCUG  GCAUCCAU UUGUAUU   CA CGACACCA  AUUUU  GAAGAACCCCU CCACC    A   |||||||||||||||||||||||| |||||||  |||| ||||||||||||  |||||||| |||||||   || ||||||||  |||||  ||||||||||| |||||   GCAUAGACCACGAGUUUCCCUAUG CACGAGU  ACGU UAAAAUUUAGAC  UGUAGGUA AGCGUAG   GU GUUGUGGU  UAAAA  CUUCUUGGGGA GGUGG    A UU                        C       GC    A            CU        A       AUU  C        --     CA           A     AAGG
Stem-loop sequence	CGUAUCUGGUGCUCAAAGGGGUACUGUGCUCAUAUGCACAUUUUAAAUCUGCUGCAUCCAUCUUGUAUUCAACGACACCAUAAUUUUACGAAGAACCCCUCCCACCAGGGAAGGAAGGUGGAAGGGGUUCUUCACAAAAUUGGUGUUGCUGUUAGAUGCGAAAUGGAUGUUCCAGAUUUAAAAUAUGCACGUGAGCACCGUAUCCCUUUGAGCACCAGAUACGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT062061.1	ncRNA:24   UUGCAUAGACCACGAGUUUCCCUA   1   ||||||||||||||||||||||=| targets:193   AACGUAUCUGGUGCUCAAAGGGGU   216 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0211A21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001350153.2	ncRNA:24   UUGCAUAGACCACGAGUUUCCCUA   1   ||||||||||||||||||||||=| targets:193   AACGUAUCUGGUGCUCAAAGGGGU   216 Target Full Sequence	1.5	Zea mays uncharacterized LOC100275401 (LOC100275401), mRNA	NA	coding protein	psRNATarget
XM_008661793.2	ncRNA:24   UUGCAUAGACCACGAGUUUCCCUA   1   |||*||||||||||||||||||=| targets:874   AACAUAUCUGGUGCUCAAAGGGGU   897 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661794.2	ncRNA:24   UUGCAUAGACCACGAGUUUCCCUA   1   |||*||||||||||||||||||=| targets:883   AACAUAUCUGGUGCUCAAAGGGGU   906 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X2, mRNA	NA	coding protein	psRNATarget