ncRNA ID | osa-miRf10968-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UCGAGCUGAGAUCGAGCUUC - NA |
Stem-loop(if miRNA) |
     CCU          CG        UC      CAA       GAGCCU    CUUGU   AGGCUCGAUU  AGCUCGGC  GAGCUC   ACGAGCU      GAGC |||||   ||||||||||  ||||||||  ||||||   |||||||      |||C GAGCA   UUCGAGCUAG  UCGAGCUG  UUCGAG   UGCUCGA      CUCU      AUC          AG        -U      ---       --AACC    |
Stem-loop sequence | CUUGUCCUAGGCUCGAUUCGAGCUCGGCUCGAGCUCCAAACGAGCUGAGCCUGAGCCUCUCCCAAAGCUCGUGAGCUUUGUCGAGCUGAGAUCGAGCUUCUAACGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK111011.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:002-174-F10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015787081.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group rRNA 2'-O-methyltransferase fibrillarin (LOC9268804), mRNA | rRNA 2'-O-methyltransferase fibrillarin(LOC9268804) | coding protein | psRNATarget |