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BaseInfo

ncRNA ID osa-miRf10968-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCGAGCUGAGAUCGAGCUUC - NA
Stem-loop(if miRNA)      CCU          CG        UC      CAA       GAGCCU   
CUUGU   AGGCUCGAUU  AGCUCGGC  GAGCUC   ACGAGCU      GAGC
|||||   ||||||||||  ||||||||  ||||||   |||||||      |||C
GAGCA   UUCGAGCUAG  UCGAGCUG  UUCGAG   UGCUCGA      CUCU
     AUC          AG        -U      ---       --AACC   
Stem-loop sequence CUUGUCCUAGGCUCGAUUCGAGCUCGGCUCGAGCUCCAAACGAGCUGAGCCUGAGCCUCUCCCAAAGCUCGUGAGCUUUGUCGAGCUGAGAUCGAGCUUCUAACGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK111011.1
ncRNA:20   CUUCGAGCUAGAGUCGAGCU   1
  *||*|*||||||||||||||
targets:250   UAACCGCGAUCUCAGCUCGA   269

2.0 Oryza sativa Japonica Group cDNA clone:002-174-F10, full insert sequence NA coding protein psRNATarget
XM_015787081.1
ncRNA:20   CUUCGAGCUAGAGUCGAGCU   1
  *||*|*||||||||||||||
targets:643   UAACCGCGAUCUCAGCUCGA   662

2.0 PREDICTED: Oryza sativa Japonica Group rRNA 2'-O-methyltransferase fibrillarin (LOC9268804), mRNA rRNA 2'-O-methyltransferase fibrillarin(LOC9268804) coding protein psRNATarget