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BaseInfo

ncRNA ID novel_zma_miR13709
Species Zea mays
Class miRNA
Genome position Chr5:55533683-55533825 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 120 - GUGGCCCGUGGGCCUGUGGGACGG - 143
Stem-loop(if miRNA) --   G        CC      -     -     G        UAA        CGGGUA      U        UGA
  GUG CCCGUGGG  UGUGGG ACGGG AGUAC UGAUAUUU   UGGAUAUU      UUUGGG AUGGAUAC   A
  ||| ||||||||  |||||| ||||| ||||| ||||||||   ||||||||      |||||| ||||||||   U
  CAU GGGUACCU  AUACCU UGCCC UCGUG ACUAUAGG   ACCUAUAA      AAAUUU UGCCUAUG   U
GA   -        --      A     A     A        --C        ------      -        UUU
Stem-loop sequence GUGGCCCGUGGGCCUGUGGGACGGGAGUACGUGAUAUUUUAAUGGAUAUUCGGGUAUUUGGGUAUGGAUACUGAAUUUUUGUAUCCGUUUUAAAAAUAUCCACGGAUAUCAAGUGCUACCCGUAUCCAUAUCCAUGGGUACAG