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BaseInfo

ncRNA ID novel_zma_miR13707
Species Zea mays
Class miRNA
Genome position Chr10:39179972-39180114 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 120 - GACGUCCAGAAUCUGUUCCGGCGC - 143
Stem-loop(if miRNA) --UA      C    -         --------C     AUGGAUGGAAAGAUAAUUUCGAGGAUCUUCCAAUGGC
    CGGAGC AGAU UUGGACGUU         UUUAU                                     A
    |||||| |||| |||||||||         |||||                                     C
    GCCUUG UCUA GACCUGCAG         UCUAU                                     C
CGCG      -    A         UUGAACAAA     UAAGGGCACCUAAGAUCUACUUAAACCUGGAUUUUGG
Stem-loop sequence UACGGAGCCAGAUUUGGACGUUCUUUAUAUGGAUGGAAAGAUAAUUUCGAGGAUCUUCCAAUGGCACCGGUUUUAGGUCCAAAUUCAUCUAGAAUCCACGGGAAUUAUCUAAACAAGUUGACGUCCAGAAUCUGUUCCGGCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT054668.2
ncRNA:24   CGCGGCCUUGUCUAAGACCUGCAG   1
  ||||||||||||||||||*|||||
targets:224   GCGCCGGAACAGAUUCUGAACGUC   247

1.5 Zea mays full-length cDNA clone ZM_BFb0059P01 mRNA, complete cds NA coding protein psRNATarget