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BaseInfo

ncRNA ID novel_zma_miR13700
Species Zea mays
Class miRNA
Genome position Chr5:28177803-28177914 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 89 - CGGACAUGUGCGGUGUGCACCGGA - 112
Stem-loop(if miRNA) --            G   G     A    ----UCCA   A    GCG    U   A  C
  CGGUGUACACCG ACA UGUCC GUGA        GGA UGAA   UCCC GGA CU G
  |||||||||||| ||| ||||| ||||        ||| ||||   |||| ||| ||
  GCCACGUGUGGC UGU ACAGG CACU        CCU GCUU   AGGG CUU GA C
AG            G   -     C    UAAUACCG   C    --A    -   C  C
Stem-loop sequence CGGUGUACACCGGACAGUGUCCAGUGAUCCAGGAAUGAAGCGUCCCUGGAACUCGCCAGCUUCGGGAAUUCGCUCCGCCAUAAUUCACCGGACAUGUGCGGUGUGCACCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241238.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2985353 NA coding protein psRNATarget
HI409108.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2074227 NA coding protein psRNATarget
JB169569.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2559767 NA coding protein psRNATarget