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BaseInfo

ncRNA ID novel_zma_miR13685
Species Zea mays
Class miRNA
Genome position Chr5:181212792-181212850 [-]
Reference genome RefGen_v4
Source SRR1583942
Length 24
Mature sequence(if miRNA) 1 - GCCGAGUGUUCUUUGCCGAGUGUA - 24
Stem-loop(if miRNA) --               C   U  C  U A
  CACUCGGCAAAGAAC CUU GC GA G A
  ||||||||||||||| ||| || || |
  GUGAGCCGUUUCUUG GAG CG UU C A
AU               U   C  U  - U
Stem-loop sequence CACUCGGCAAAGAACCCUUUGCCGAUGAAAUCUUUGCCGAGUGUUCUUUGCCGAGUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949560.1
ncRNA:24   AUGUGAGCCGUUUCUUGUGAGCCG   1
  ||||||||||||||||||||||*|
targets:548   UACACUCGGCAAAGAACACUCGAC   571

1.5 Zea mays clone 424771 mRNA sequence NA coding protein psRNATarget
XM_008657292.2
ncRNA:24   AUGUGAGCCGUUUCUUGUGAGCCG   1
  *==*||||||=|||||||*|||||
targets:1105   CGUCCUCGGCGAAGAACAGUCGGC   1128

2.5 PREDICTED: Zea mays uncharacterized protein DDB_G0271670 (LOC103634698), mRNA NA coding protein psRNATarget