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BaseInfo

ncRNA ID	novel_zma_miR13681
Species	Zea mays
Class	miRNA
Genome position	Chr10:15275616-15275702 [-]
Reference genome	RefGen_v4
Source	SRR1997866
Length	23
Mature sequence(if miRNA)	1 - GCUGUGAGCUGUGGAAAAGGCUG - 23
Stem-loop(if miRNA)	--                   A      A          C   G   GUUUUUUUCACAGCUCACA CCCACA CAGCUUUUUU ACA A   ||||||||||||||||||| |||||| |||||||||| |||   CGGAAAAGGUGUCGAGUGU GGGUGU GUCGAAAAAA UGU G GU                   C      A          -   C
Stem-loop sequence	GUUUUUUUCACAGCUCACAACCCACAACAGCUUUUUUCACAGAGCUGUAAAAAAGCUGAUGUGGGCUGUGAGCUGUGGAAAAGGCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU945925.1	ncRNA:23   GUCGGAAAAGGUGUCGAGUGUCG   1   ||||=|||||||||||||||||| targets:845   CAGCUUUUUCCACAGCUCACAGC   867 Target Full Sequence	1.0	Zea mays clone 290258 mRNA sequence	NA	coding protein	psRNATarget
EU961185.1	ncRNA:23   GUCGGAAAAGGUGUCGAGUGUCG   1   ||||=|||||||||||||||||| targets:916   CAGCUUUUUCCACAGCUCACAGC   938 Target Full Sequence	1.0	Zea mays clone 233237 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150116.1	ncRNA:23   GUCGGAAAAGGUGUCGAGUGUCG   1   ||||=|||||||||||||||||| targets:916   CAGCUUUUUCCACAGCUCACAGC   938 Target Full Sequence	1.0	Zea mays uncharacterized LOC100276292 (umc2168), mRNA	NA	coding protein	psRNATarget
BT061539.1	ncRNA:23   GUCGGAAAAGGUGUCGAGUGUCG   1   ||||=||||=||||||||||||| targets:1205   CAGCUUUUUUCACAGCUCACAGC   1227 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0156G14 mRNA, complete cds	NA	coding protein	psRNATarget
EU973149.1	ncRNA:23   GUCGGAAAAGGUGUCGAGUGUCG   1   *|||=|||||=|||||||||||| targets:1073   AAGCUUUUUCUACAGCUCACAGC   1095 Target Full Sequence	2.5	Zea mays clone 394137 mRNA sequence	NA	coding protein	psRNATarget