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BaseInfo

ncRNA ID novel_zma_miR13679
Species Zea mays
Class miRNA
Genome position Chr5:9464801-9464923 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 100 - AAACCACUAGUAACCGAACAUGGC - 123
Stem-loop(if miRNA) ---U              -   A     AG         A                      A
    UGUUCGGUUGCUAG GGU UUGAA  GGAUUGAAG GGAUUAAAUCCUCUCCUAUUCA U
    |||||||||||||| ||| |||||  ||||||||| ||||||||||||||||||||||
    ACAAGCCAAUGAUC CCA AACUU  CCUAACUUC CCUAAUUUAGGGGAGGAUAAGU U
CGGU              A   -     CU         C                      U
Stem-loop sequence UUGUUCGGUUGCUAGGGUAUUGAAAGGGAUUGAAGAGGAUUAAAUCCUCUCCUAUUCAAUUUUGAAUAGGAGGGGAUUUAAUCCCCUUCAAUCCUCUUCAAACCACUAGUAACCGAACAUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ059519.1
ncRNA:24   CGGUACAAGCCAAUGAUCACCAAA   1
  ||||*|||||||||||||||||||
targets:412   GCCACGUUCGGUUACUAGUGGUUU   435

0.0 TSA: Zea mays contig60641, mRNA sequence NA coding protein psRNATarget