Search result

BaseInfo

ncRNA ID novel_zma_miR13677
Species Zea mays
Class miRNA
Genome position Chr5:89296418-89296588 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 148 - GUCAUAAACAUGGGAUAUGUCGGU - 171
Stem-loop(if miRNA) --     -AG                  -         AUA  AAA   CA             C          C      G C G
  CGACG   CCCGUGUUUAUGACAAGG CAUGUGCUC   CG   UUU  GCAGCAUAACCCC UUGUUCUCUA UCGCAC C U A
  |||||   |||||||||||||||||| |||||||||   ||   |||  ||||||||||||| |||||||||| |||||| | |
  GCUGU   GGGUACAAAUACUGUUUC GUACACGAG   GC   AAA  CGUCGUAUUGGGG AACAAGAGGU AGCGUG G A A
UG     AUA                  U         AAC  AUC   AC             A          U      - U A
Stem-loop sequence CGACGAGCCCGUGUUUAUGACAAGGCAUGUGCUCAUACGAAAUUUCAGCAGCAUAACCCCCUUGUUCUCUACUCGCACGCCUGAAAAUGGUGCGAUUGGAGAACAAAGGGGUUAUGCUGCCAAAACUACGCAAGAGCACAUGUCUUUGUCAUAAACAUGGGAUAUGUCGGU