ncRNA ID | novel_zma_miR13675 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:5073747-5073845 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997866 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGAUAUUUACACUGGCGGUUGGU - 24 |
Stem-loop(if miRNA) |
--         A      C    -G  GUA  AG           A       AGGAUAUUU CACUGG GGUU  GU   AC  AACCGCCAGUG AAAUA   ||||||||| |||||| ||||  ||   ||  ||||||||||| ||||U   UCCUAUAAA GUGACC CCAA  CA   UG  UUGGCGGUCAC UUUAA UA         G      A    GA  AUG  -G           C     |
Stem-loop sequence | AGGAUAUUUACACUGGCGGUUGGUGUAACAGAACCGCCAGUGAAAAUAUAAUUUCCACUGGCGGUUGGUGUAACAGAACCACCAGUGGAAAUAUCCUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ101180.1 |
|
1.5 | TSA: Zea mays contig36836, mRNA sequence | NA | coding protein | psRNATarget |