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BaseInfo

ncRNA ID novel_zma_miR13675
Species Zea mays
Class miRNA
Genome position Chr4:5073747-5073845 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - AGGAUAUUUACACUGGCGGUUGGU - 24
Stem-loop(if miRNA) --         A      C    -G  GUA  AG           A    
  AGGAUAUUU CACUGG GGUU  GU   AC  AACCGCCAGUG AAAUA
  ||||||||| |||||| ||||  ||   ||  ||||||||||| ||||U
  UCCUAUAAA GUGACC CCAA  CA   UG  UUGGCGGUCAC UUUAA
UA         G      A    GA  AUG  -G           C    
Stem-loop sequence AGGAUAUUUACACUGGCGGUUGGUGUAACAGAACCGCCAGUGAAAAUAUAAUUUCCACUGGCGGUUGGUGUAACAGAACCACCAGUGGAAAUAUCCUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UGGUUGGCGGUCACAUUUAUAGGA   1
  ||||||||||||||*|||||||||
targets:78   ACCAACCGCCAGUGGAAAUAUCCU   101

1.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget