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BaseInfo

ncRNA ID novel_zma_miR13670
Species Zea mays
Class miRNA
Genome position Chr4:19606611-19606720 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - CGGACAUGUGCGGUGUGCACCGGA - 24
Stem-loop(if miRNA) --     UG     G             G    CGG  C    --    U AA   U
  CGGUG  CACCG ACAUGUCCGGUGC CCAA   CU UCUA  GCUG C  CGG C
  |||||  ||||| ||||||||||||| ||||   || ||||  |||| |  |||
  GCCAC  GUGGC UGUACAGGCCACG GGUU   GA AGGU  UGAC G  GUC G
AG     GU     G             -    AAA  A    AU    C -C   A
Stem-loop sequence CGGUGUGCACCGGACAUGUCCGGUGCGCCAACGGCUCUCUAGCUGUCAACGGUCGACUGCGCCAGUUAUGGAAAGAAAUUGGGCACCGGACAUGUGCGGUGUGCACCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409108.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2074227 NA coding protein psRNATarget
LQ241238.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2985353 NA coding protein psRNATarget
JB169569.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2559767 NA coding protein psRNATarget