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BaseInfo

ncRNA ID	novel_zma_miR13668
Species	Zea mays
Class	miRNA
Genome position	Chr5:182585930-182586049 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	22
Mature sequence(if miRNA)	1 - AAAUACGAUUUCUAGUGGCAGU - 22
Stem-loop(if miRNA)	--C              -              U      A          AC            GCCACUAGAAAUCG AUUUCUAUAGGCGG UUCUUA GAAAACCGCC  UAGAAAUCA    |||||||||||||| |||||||||||||| |||||| ||||||||||  ||||||||U    CGGUGAUCUUUAGC UAAAGAUAUCCGCC AGGAAU CUUUUGGCGG  AUCUUUAGA UGA              A              U      A          AC
Stem-loop sequence	CGCCACUAGAAAUCGAUUUCUAUAGGCGGUUUCUUAAGAAAACCGCCACUAGAAAUCAUAGAUUUCUACAGGCGGUUUUCAUAAGGAUCCGCCUAUAGAAAUACGAUUUCUAGUGGCAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI405882.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*||||||||||||||||||| targets:40   ACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	0.0	Sequence 4007 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238012.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*||||||||||||||||||| targets:40   ACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	0.0	Sequence 4007 from Patent EP2985353	NA	coding protein	psRNATarget
JB166343.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*||||||||||||||||||| targets:40   ACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	0.0	Sequence 4007 from Patent EP2559767	NA	coding protein	psRNATarget
HI402986.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*||||||||||||||||||| targets:18   ACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	0.0	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*||||||||||||||||||| targets:18   ACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	0.0	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
JB163447.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*||||||||||||||||||| targets:18   ACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	0.0	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*|=|||||||||||*||||| targets:18   ACCGUCACUAGAAAUCAUAUUU   39 Target Full Sequence	2.5	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
JB163445.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*|=|||||||||||*||||| targets:18   ACCGUCACUAGAAAUCAUAUUU   39 Target Full Sequence	2.5	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
HI402984.1	ncRNA:22   UGACGGUGAUCUUUAGCAUAAA   1   ||*|=|||||||||||*||||| targets:18   ACCGUCACUAGAAAUCAUAUUU   39 Target Full Sequence	2.5	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget