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BaseInfo

ncRNA ID novel_zma_miR13665
Species Zea mays
Class miRNA
Genome position Chr5:184918837-184918919 [-]
Reference genome RefGen_v4
Source SRR1583942
Length 24
Mature sequence(if miRNA) 1 - GAAAAAAAUGUAUCUAGAAAAGCU - 24
Stem-loop(if miRNA) --               A        U   CA        G
  CUUUUCUAGGUACAU UUUUUUGU AUG  UCUAGAUA C
  ||||||||||||||| |||||||| |||  |||||||| A
  GAAAAGAUCUAUGUA AAAAAGCG UAC  AGAUCUAU U
UC               A        U   AC        A
Stem-loop sequence CUUUUCUAGGUACAUAUUUUUUGUUAUGCAUCUAGAUAGCAUAUAUCUAGACACAUUGCGAAAAAAAUGUAUCUAGAAAAGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008675257.2
ncRNA:24   UCGA-AAAGAUCUAUGUAAAAAAAG   1
  |*||-|||*|||||*||||||||||
targets:1096   AUCUAUUUAUAGAUCCAUUUUUUUC   1120

2.5 PREDICTED: Zea mays hypothetical protein (LOC103649540), mRNA NA coding protein psRNATarget