Search result

BaseInfo

ncRNA ID novel_zma_miR13654
Species Zea mays
Class miRNA
Genome position Chr4:240501347-240501436 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - AACCGGAGAGAAUUAGAGGGGCUA - 24
Stem-loop(if miRNA) --          A   AG           C ACA          A
  AACCGGAGAG AUU  AGGGGCUAAAA C   UUCUUAUUCA A
  |||||||||| |||  ||||||||||| |   ||||||||||
  UUGGCUUCUC UAA  UCCCCGAUUUU G   AGGAAUAAGU A
UU          C   CU           A AAG          U
Stem-loop sequence AACCGGAGAGAAUUAGAGGGGCUAAAACCACAUUCUUAUUCAAAAUUGAAUAAGGAGAAGAUUUUAGCCCCUUCAAUCCUCUUCGGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU957568.1
ncRNA:24   AUCGGGGAGAUUAAGAGAGGCCAA   1
  ||||*|*||*||||||||||||||
targets:915   UAGCGCAUCCAAUUCUCUCCGGUU   938

2.0 Zea mays clone 1597470 hypothetical protein mRNA, complete cds NA coding protein psRNATarget