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BaseInfo

ncRNA ID	novel_zma_miR13652
Species	Zea mays
Class	miRNA
Genome position	Chr3:225371082-225371161 [+]
Reference genome	RefGen_v4
Source	SRR5451006
Length	24
Mature sequence(if miRNA)	57 - CAGUUGAACUGGACCGCCUGUGAU - 80
Stem-loop(if miRNA)	--            CU  G                   UG   CACAGGCGGUUC  UU AACUGAACCGCCUGUGAUG  U   ||||||||||||  || |||||||||||||||||||   GUGUCCGCCAGG  AA UUGACUUGGCGGACACUAU  G UA            UC  G                   CU
Stem-loop sequence	CACAGGCGGUUCCUUUGAACUGAACCGCCUGUGAUGUGUGUCUAUCACAGGCGGUUCAGUUGAACUGGACCGCCUGUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001346990.1	ncRNA:24   UAGUGUCCGCCAGGUCAAGUUGAC   1   ||=|||||||||||||||||||*| targets:1360   AUUACAGGCGGUCCAGUUCAACGG   1383 Target Full Sequence	1.5	Zea mays WAT1-related protein (LOC100304260), transcript variant 2, mRNA	NA	coding protein	psRNATarget
XM_008683066.2	ncRNA:24   UAGUGUCCGCCAGGUCAAGUUGAC   1   ||=|||||||||||||||||||*| targets:1430   AUUACAGGCGGUCCAGUUCAACGG   1453 Target Full Sequence	1.5	PREDICTED: Zea mays WAT1-related protein (LOC100304260), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT068055.1	ncRNA:24   UAGUGUCCGCCAGGUCAAGUUGAC   1   ||=|||||||||||||||||||*| targets:1495   AUUACAGGCGGUCCAGUUCAACGG   1518 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0031N10 mRNA, complete cds	NA	coding protein	psRNATarget
BT086495.1	ncRNA:24   UAGUGUCCGCCAGGUCAAGUUGAC   1   ||=|||||||||||||||||||*| targets:1569   AUUACAGGCGGUCCAGUUCAACGG   1592 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0172L11 mRNA, complete cds	NA	coding protein	psRNATarget