ncRNA ID | novel_zma_miR13651 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:227737768-227737896 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997866 |
Length | 24 |
Mature sequence(if miRNA) | 106 - ACUUUAGGGAAACUGUUGGAGACA - 129 |
Stem-loop(if miRNA) |
--          -A     U    C  - -A    G      GGG    --A     -   -AU     A   UCUCCAACAG  UCCCU AAAG GC C  GAUU UUUUUA   AGCC   AAAAC CCC   UUUGU G   ||||||||||  ||||| |||| || |  |||| ||||||   ||||   ||||| |||   |||||   AGAGGUUGUC  AGGGA UUUC CG G  UUGA AAAAGU   UCGG   UUUUG GGG   AAACA C AC          AA     -    A  A GG    -      --A    GAA     A   AGU     U |
Stem-loop sequence | UCUCCAACAGAUCCCUUAAAGCGCCAGAUUGUUUUUAGGGAGCCAAAAACCCCAUUUUGUAGCUACAAAUGAGGGAGUUUUAAGGGCUAUGAAAAAGUUGGGAGCACUUUAGGGAAACUGUUGGAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ050474.1 |
|
2.5 | TSA: Zea mays contig51594, mRNA sequence | NA | coding protein | psRNATarget |