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BaseInfo

ncRNA ID	novel_zma_miR13642
Species	Zea mays
Class	miRNA
Genome position	Chr4:192874001-192874054 [+]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	1 - UGAAUUUUUUACGAGCUGAGCUGA - 24
Stem-loop(if miRNA)	--  A   UUUU              C   UG AUU    ACGAGCUGAGCUGA A   || |||    ||||||||||||||   AC UAG    UGCUUGGCUCGAUU U GG  G   UAAU              C
Stem-loop sequence	UGAAUUUUUUACGAGCUGAGCUGACAUCUUAGCUCGGUUCGUUAAUGAUGCAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT087702.1	ncRNA:24   AGUCGAGUCGAGCAUU-UUUUAAGU   1   ||||||||||||||||-|||||||| targets:207   UCAGCUCAGCUCGUAACAAAAUUCA   231 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0162M16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020540691.1	ncRNA:24   AGUC-GAGUCGAGCAUUUUUUAAGU   1   |||*-||=||||||*|||||||||| targets:761   UCAUACUUAGCUCGAAAAAAAUUCA   785 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6-like (myosin), transcript variant X2, mRNA	NA	coding protein	psRNATarget
KF493893.1	ncRNA:24   AGUC-GAGUCGAGCAUUUUUUAAGU   1   |||*-||=||||||*|||||||||| targets:2479   UCAUACUUAGCUCGAAAAAAAUUCA   2503 Target Full Sequence	2.5	Zea mays cultivar W22 clone ZmXI-9 myosin mRNA, complete cds	NA	coding protein	psRNATarget
NM_001301539.1	ncRNA:24   AGUC-GAGUCGAGCAUUUUUUAAGU   1   |||*-||=||||||*|||||||||| targets:2479   UCAUACUUAGCUCGAAAAAAAUUCA   2503 Target Full Sequence	2.5	Zea mays myosin-6-like (myosin), mRNA	NA	coding protein	psRNATarget
XM_020540690.1	ncRNA:24   AGUC-GAGUCGAGCAUUUUUUAAGU   1   |||*-||=||||||*|||||||||| targets:2561   UCAUACUUAGCUCGAAAAAAAUUCA   2585 Target Full Sequence	2.5	PREDICTED: Zea mays myosin-6-like (myosin), transcript variant X1, mRNA	NA	coding protein	psRNATarget