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BaseInfo

ncRNA ID novel_zma_miR13639
Species Zea mays
Class miRNA
Genome position Chr2:167818578-167818627 [-]
Reference genome RefGen_v4
Source SRR5451006
Length 24
Mature sequence(if miRNA) 1 - UUAUUUUCGGCGGCCAGAUGUCAG - 24
Stem-loop(if miRNA) --  UG                  G
  GG  UCUGGCCGUCGAAAAUAA C
  ||  ||||||||||||||||||
  CU  AGACCGGCGGCUUUUAUU C
GA  GU                  A
Stem-loop sequence GGUGUCUGGCCGUCGAAAAUAAGCCAUUAUUUUCGGCGGCCAGAUGUCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546193.1
ncRNA:24   GACUGUAGACCGGCGGCUUUUAUU   1
  |||=**||||||||||||||||||
targets:513   CUGGGCUCUGGCCGCCGAAAAUAA   536

1.0 PREDICTED: Zea mays spidroin-1-like (LOC103636899), mRNA NA coding protein psRNATarget