Search result

BaseInfo

ncRNA ID	novel_zma_miR13634
Species	Zea mays
Class	miRNA
Genome position	Chr4:181431995-181432105 [+]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	88 - AGCACCGUUGGAUGUGGAAGGUGU - 111
Stem-loop(if miRNA)	--   C                           A      U         A AGAG   ACC UCCACAUCCAACGGUGCUGUGUUAGGG GGUUUU GUAAAAUGU C    U   ||| ||||||||||||||||||||||||||| |||||| ||||||||| |    U   UGG AGGUGUAGGUUGCCACGACGUAGUCCC CCAAAA UAUUUUACA G    G UG   A                           -      -         A AAAC
Stem-loop sequence	ACCCUCCACAUCCAACGGUGCUGUGUUAGGGAGGUUUUUGUAAAAUGUACAGAGUUGCAAAGAACAUUUUAUAAAACCCCCUGAUGCAGCACCGUUGGAUGUGGAAGGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008681149.2	ncRNA:24   UGUGGAAGGUGUAGGUUGCCACGA   1   |||||*|||||||||||||||||| targets:591   ACACCCUCCACAUCCAACGGUGCU   614 Target Full Sequence	1.0	PREDICTED: Zea mays mini zinc finger protein 1 (LOC103654311), mRNA	NA	coding protein	psRNATarget
XM_020539811.1	ncRNA:24   UGUGGAAGGUGUAGGUUGCCACGA   1   |||||*|||||||||||||||||| targets:1549   ACACCCUCCACAUCCAACGGUGCU   1572 Target Full Sequence	1.0	PREDICTED: Zea mays anthocyanidin 3-O-glucoside 6''-O-acyltransferase (LOC103631128), mRNA	NA	coding protein	psRNATarget
XM_008660409.2	ncRNA:24   UGUGGAAGGUGUAGGUUGCCACGA   1   |||||*||||=||||||||||||| targets:1267   ACACCCUCCAUAUCCAACGGUGCU   1290 Target Full Sequence	2.0	PREDICTED: Zea mays homeodomain-leucine zipper transcription factor TaHDZipI-1 (LOC100282963), transcript variant X1, mRNA	NA	coding protein	psRNATarget