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BaseInfo

ncRNA ID	novel_zma_miR13633
Species	Zea mays
Class	miRNA
Genome position	Chr10:113241733-113241929 [-]
Reference genome	RefGen_v4
Source	SRR5451006
Length	24
Mature sequence(if miRNA)	174 - AUAUCACAUGUAGAGGCUGUGAUA - 197
Stem-loop(if miRNA)	-AUAU      -   AG  U          A       -UGU  G             G   G        G        G   A      A      CA      CACAUG UAG  GC GUGAUAAAAA UUUAGAA    UU GAGAGAGUUGUGA AUA UAUGUGUA AAAUCUAA AGA CUACAU UGAAAU  U      |||||| |||  || |||||||||| |||||||    || ||||||||||||| ||| |||||||| |||||||| ||| |||||| ||||||      GUGUGC AUU  UG UACUAUUUUU AAAUUUU    AA CUCUUUCGACACU UGU AUAUACAU UUUGGAUU UCU GGUGUA AUUUUG  A UUUGU      C   GG  -          A       UUUU  G             G   G        A        A   A      -      AG
Stem-loop sequence	AUAUCACAUGUAGAGGCUGUGAUAAAAAAUUUAGAAUGUUUGGAGAGAGUUGUGAGAUAGUAUGUGUAGAAAUCUAAGAGAACUACAUAUGAAAUCAUAGAGUUUUAAUGUGGAUCUAUUAGGUUUAUACAUAUAGUGUGUCACAGCUUUCUCGAAUUUUUUUUAAAAUUUUUAUCAUGUGGUUACCGUGUGUGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163670.1	ncRNA:24   AUAGUGUCGGAGAUGUACACUAUA   1   |||||||||||||||||*|||||| targets:201   UAUCACAGCCUCUACAUAUGAUAU   224 Target Full Sequence	1.5	Sequence 1334 from Patent EP2559767	NA	coding protein	psRNATarget
HI403209.1	ncRNA:24   AUAGUGUCGGAGAUGUACACUAUA   1   |||||||||||||||||*|||||| targets:201   UAUCACAGCCUCUACAUAUGAUAU   224 Target Full Sequence	1.5	Sequence 1334 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235339.1	ncRNA:24   AUAGUGUCGGAGAUGUACACUAUA   1   |||||||||||||||||*|||||| targets:201   UAUCACAGCCUCUACAUAUGAUAU   224 Target Full Sequence	1.5	Sequence 1334 from Patent EP2985353	NA	coding protein	psRNATarget
EZ089840.1	ncRNA:20   UGUCGGAGAUGUACACUAUA   1   |||||||||||||*|||||| targets:1   ACAGCCUCUACAUAUGAUAU   20 Target Full Sequence	1.5	TSA: Zea mays contig25486, mRNA sequence	NA	coding protein	psRNATarget