ncRNA ID | ath-miRf10144-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UCGAGCUCGUGGUCGAGUGGUG - NA |
Stem-loop(if miRNA) |
   GA  -G  UU         G           AA     AGGG     -GA G -AUGU        A GGC  UG  UG  GCUCGAUCA GGGCUCGAGUG  UGGCG    AUUGU   U G     GCUCGACC A |||  ||  ||  ||||||||| |||||||||||  |||||    |||||   | |     |||||||| CUG  AU  GU  UGAGCUGGU CUCGAGCUCAU  ACUGU    UGGCA   A U     UGAGCUGG U    AG  AG  GG         G           CG     --AG     AAG G GGUGG        U |
Stem-loop sequence | GGCGAUGGUGUUGCUCGAUCAGGGGCUCGAGUGAAUGGCGAGGGAUUGUGAUGGAUGUGCUCGACCAAUUGGUCGAGUGGUGGUGAGAAACGGUGAUGUCAGCUACUCGAGCUCGUGGUCGAGUGGUGGAUAGAGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_103391.1 |
|
1.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget | |||||||||
EF183042.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget |