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BaseInfo

ncRNA ID ath-miRf10144-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UCGAGCUCGUGGUCGAGUGGUG - NA
Stem-loop(if miRNA)    GA  -G  UU         G           AA     AGGG     -GA G -AUGU        A
GGC  UG  UG  GCUCGAUCA GGGCUCGAGUG  UGGCG    AUUGU   U G     GCUCGACC A
|||  ||  ||  ||||||||| |||||||||||  |||||    |||||   | |     ||||||||
CUG  AU  GU  UGAGCUGGU CUCGAGCUCAU  ACUGU    UGGCA   A U     UGAGCUGG U
   AG  AG  GG         G           CG     --AG     AAG G GGUGG        U
Stem-loop sequence GGCGAUGGUGUUGCUCGAUCAGGGGCUCGAGUGAAUGGCGAGGGAUUGUGAUGGAUGUGCUCGACCAAUUGGUCGAGUGGUGGUGAGAAACGGUGAUGUCAGCUACUCGAGCUCGUGGUCGAGUGGUGGAUAGAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_103391.1
ncRNA:22   GUGGUGAGCUGGUGCUCGAGCU   1
  |||||||||||||||||*||||
targets:1148   CACCACUCGACCACGAGGUCGA   1169

1.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
EF183042.1
ncRNA:22   GUGGUGAGCUGGUGCUCGAGCU   1
  *||||||||||||||||*||||
targets:1524   AACCACUCGACCACGAGGUCGA   1545

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget