Search result

BaseInfo

ncRNA ID novel_zma_miR13610
Species Zea mays
Class miRNA
Genome position Chr1:161653766-161653883 [-]
Reference genome RefGen_v4
Source SRR5451006
Length 24
Mature sequence(if miRNA) 1 - ACAGGACGGCACUCGGCAAAGACA - 24
Stem-loop(if miRNA) --G                AU   U         --CC             UUA      CG
   CUUUGCCGAGUGUUGU  UCU UGCCGAGUG    GCACUCGGUAAAG   GGCUCU  G
   ||||||||||||||||  ||| |||||||||    |||||||||||||   ||||||
   GAAACGGCUCACGGCA  GGA ACGGCUCAC    CGUGAGCCAUUUC   CCGAGA  C
ACA                --   C         AAGU             --C      AA
Stem-loop sequence GCUUUGCCGAGUGUUGUAUUCUUUGCCGAGUGCCGCACUCGGUAAAGUUAGGCUCUCGGCAAAGAGCCCCUUUACCGAGUGCUGAACACUCGGCACAGGACGGCACUCGGCAAAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166323.1
ncRNA:24   ACAGAAACGGCUCACGGCAGGACA   1
  ***|||||||||||||=|||||||
targets:97   CCCCUUUGCCGAGUGCUGUCCUGU   120

1.5 Sequence 3987 from Patent EP2559767 NA coding protein psRNATarget
HI405862.1
ncRNA:24   ACAGAAACGGCUCACGGCAGGACA   1
  ***|||||||||||||=|||||||
targets:97   CCCCUUUGCCGAGUGCUGUCCUGU   120

1.5 Sequence 3987 from Patent EP2074227 NA coding protein psRNATarget
LQ237992.1
ncRNA:24   ACAGAAACGGCUCACGGCAGGACA   1
  ***|||||||||||||=|||||||
targets:97   CCCCUUUGCCGAGUGCUGUCCUGU   120

1.5 Sequence 3987 from Patent EP2985353 NA coding protein psRNATarget