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BaseInfo

ncRNA ID novel_zma_miR13602
Species Zea mays
Class miRNA
Genome position Chr1:266445539-266445644 [-]
Reference genome RefGen_v4
Source SRR5451006
Length 24
Mature sequence(if miRNA) 83 - AAAUAGGAUGUUUCCACUGACGGU - 106
Stem-loop(if miRNA) --                   A         UAAGA                U
  AAAUAGGAUGUUUCCACUG CGGUUGUGU     UAACCGCCAGUGGAAA C
  ||||||||||||||||||| |||||||||     ||||||||||||||||
  UUUAUCCUACAAAGGUGAC GCCAACACA     GUUGGCGGUCACUUUU A
CC                   C         UUGUG                A
Stem-loop sequence AAAUAGGAUGUUUCCACUGACGGUUGUGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UGGCAGUCACCUUUGUAGGAUAAA   1
  ||||*|||||||||=|||||||||
targets:82   ACCGCCAGUGGAAAUAUCCUAUUU   105

1.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget