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BaseInfo

ncRNA ID novel_zma_miR13597
Species Zea mays
Class miRNA
Genome position Chr1:296557290-296557344 [+]
Reference genome RefGen_v4
Source SRR5451006
Length 24
Mature sequence(if miRNA) 32 - GUCAGAUCUGGAUGUAGAGGGCGA - 55
Stem-loop(if miRNA) --      G   CU    AG    GGA
  GCUCUU GCA  UAGA  UGAC   C
  |||||| |||  ||||  ||||   G
  CGGGAG UGU  GUCU  ACUG   C
AG      A   AG    AG    AGA
Stem-loop sequence GCUCUUGGCACUUAGAAGUGACGGACGCAGAGUCAGAUCUGGAUGUAGAGGGCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ073787.1
ncRNA:24   AGCGGGAGAUGUAGGUCUAGACUG   1
  *|*|||*=*|||||||||||||||
targets:2   GCUCCCGUGACAUCCAGAUCUGAC   25

3.0 TSA: Zea mays contig09424, mRNA sequence NA coding protein psRNATarget