Search result

BaseInfo

ncRNA ID novel_zma_miR13581
Species Zea mays
Class miRNA
Genome position Chr8:55103721-55103769 [-]
Reference genome RefGen_v4
Source SRR5451006;SRR2089707
Length 24
Mature sequence(if miRNA) 26 - GGUUAAAGAGUAGAAUAGAGCGGA - 49
Stem-loop(if miRNA) --  UU   G  U           G
  GG  AAA AG AGAAUAGAGCG A
  ||  ||| || |||||||||||
  UU  UUU UC UCUUGUCUCGC A
GG  GG   G  -           U
Stem-loop sequence GGUUAAAGAGUAGAAUAGAGCGGAAUCGCUCUGUUCUCUGUUUGGUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   AGGCGAGAUAAGAUGAGAAAUUGG   1
  |||||||||||||||||||*||||
targets:106   UCCGCUCUAUUCUACUCUUCAACC   129

1.5 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget
BT084215.2
ncRNA:24   AGGCGAGAUAAGAUGAGAAAUUGG   1
  |||*|||||||||||||||*|||*
targets:1038   UCCACUCUAUUCUACUCUUCAACG   1061

2.5 Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds NA coding protein psRNATarget