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BaseInfo

ncRNA ID novel_zma_miR13576
Species Zea mays
Class miRNA
Genome position Chr4:120115621-120115668 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 22
Mature sequence(if miRNA) 1 - GUACGACGCGGAGUAGUGGCGC - 22
Stem-loop(if miRNA) --    G       GU  U    C
  GUAC ACGCGGA  AG GGCG U
  |||| |||||||  || |||| G
  CAUG UGCGCCU  UC CCGU A
AG    A       AC  -    A
Stem-loop sequence GUACGACGCGGAGUAGUGGCGCUGAAUGCCCUCAUCCGCGUAGUACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538918.1
ncRNA:22   CGCGGUGAUGAGGCGCAGCAUG   1
  *|||||||||||||||*|||||
targets:1417   ACGCCACUACUCCGCGCCGUAC   1438

1.5 PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X2, mRNA NA coding protein psRNATarget