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BaseInfo

ncRNA ID novel_zma_miR13571
Species Zea mays
Class miRNA
Genome position Chr8:141636628-141636703 [+]
Reference genome RefGen_v4
Source SRR5451006
Length 24
Mature sequence(if miRNA) 53 - GGGGCGGACUGUCCGCGGCCUGGU - 76
Stem-loop(if miRNA) --G     --           GG   G    -   -    G
   GGGCC  GGACGGUCCGC  CCU GUGC GAG GCGC G
   |||||  |||||||||||  ||| |||| ||| ||||
   UCCGG  CCUGUCAGGCG  GGG CGCG CUC CGUG U
UGG     CG           --   A    U   U    G
Stem-loop sequence GGGGCCGGACGGUCCGCGGCCUGGUGCGAGGCGCGGUGGUGCUCUCUGCGCAGGGGCGGACUGUCCGCGGCCUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539115.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGG   1
  *|||||||||||||||||||||||
targets:2707   CCCAGGCCGCGGACAGUCCGCCCC   2730

0.0 PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA NA coding protein psRNATarget
NM_001196968.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGG   1
  *=||||||||||||||||||||||
targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287

0.0 Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA NA coding protein psRNATarget
BT088349.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGG   1
  *=||||||||||||||||||||||
targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287

0.0 Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds NA coding protein psRNATarget