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BaseInfo

ncRNA ID	novel_zma_miR13569
Species	Zea mays
Class	miRNA
Genome position	Chr8:117573207-117573322 [+]
Reference genome	RefGen_v4
Source	SRR5451006
Length	24
Mature sequence(if miRNA)	93 - AAAGUACUCGGCAAAGAAGACUUU - 116
Stem-loop(if miRNA)	--GC                  ---  - U        AC    UC          A  U     UUUUCUUUGCCGAGUACU   UC C GGCACUCG  AAAG  UUUGCCGAGU CU C     ||||||||||||||||||   || | ||||||||  ||||  |||||||||| ||     AGAAGAAACGGCUCAUGA   AG G UCGUGAGC  UUUC  AAACGGCUCA GG C UUUC                  AAA  A U        CA    UA          C  U
Stem-loop sequence	GCUUUUCUUUGCCGAGUACUUCCUGGCACUCGACAAAGUCUUUGCCGAGUACUUCCUGGCACUCGGCAAAAUCUUUACCGAGUGCUUGAGAAAAAGUACUCGGCAAAGAAGACUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167714.1	ncRNA:24   UUUCAGAAGAAACGGCUCAUGAAA   1   ||||*||||||||||||||||||| targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51 Target Full Sequence	0.0	Sequence 5378 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239383.1	ncRNA:24   UUUCAGAAGAAACGGCUCAUGAAA   1   ||||*||||||||||||||||||| targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51 Target Full Sequence	0.0	Sequence 5378 from Patent EP2985353	NA	coding protein	psRNATarget
HI407253.1	ncRNA:24   UUUCAGAAGAAACGGCUCAUGAAA   1   ||||*||||||||||||||||||| targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51 Target Full Sequence	0.0	Sequence 5378 from Patent EP2074227	NA	coding protein	psRNATarget
EU974507.1	ncRNA:24   UU-UCAGAAGAAACGGCUCAUGAAA   1   ||-||-||||||||||||||||||| targets:441   AACAG-CUUCUUUGCCGAGUACUUU   464 Target Full Sequence	0.0	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
JB167428.1	ncRNA:24   UUUCAGAAGAAACGGCUCAUGAAA   1   ||||***||||||||||||||||* targets:49   AAAGCGCUCUUUGCCGAGUACUUC   72 Target Full Sequence	3.0	Sequence 5092 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239097.1	ncRNA:24   UUUCAGAAGAAACGGCUCAUGAAA   1   ||||***||||||||||||||||* targets:49   AAAGCGCUCUUUGCCGAGUACUUC   72 Target Full Sequence	3.0	Sequence 5092 from Patent EP2985353	NA	coding protein	psRNATarget
HI406967.1	ncRNA:24   UUUCAGAAGAAACGGCUCAUGAAA   1   ||||***||||||||||||||||* targets:49   AAAGCGCUCUUUGCCGAGUACUUC   72 Target Full Sequence	3.0	Sequence 5092 from Patent EP2074227	NA	coding protein	psRNATarget
EU957858.1	ncRNA:24   UUUCAGAAGAAACGGCUCAUGAAA   1   ||*|*|||*|||*||||||||||| targets:1235   AACGGCUUAUUUACCGAGUACUUU   1258 Target Full Sequence	2.5	Zea mays clone 1627310 mRNA sequence	NA	coding protein	psRNATarget