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BaseInfo

ncRNA ID novel_zma_miR13561
Species Zea mays
Class miRNA
Genome position Chr7:21343416-21343542 [+]
Reference genome RefGen_v4
Source SRR5451006
Length 24
Mature sequence(if miRNA) 104 - GCGGCUGUUGCGCGAGAUCGGCGG - 127
Stem-loop(if miRNA) --     - A                      A     GGGGA    -G -       AA      G
  GCUGG C UGUGCGGCGGCUGUUGCGCGUG UCGGC     CGGC  C CGCCCGC  CAUUCG G
  ||||| | |||||||||||||||||||||| |||||     ||||  | |||||||  ||||||
  CGGCU G GCGCGUUGUCGGCGGCGUGUAC GGUCG     GCCG  G GCGGGUG  GUAGGC U
GG     A A                      -     ---GG    GA C       CC      G
Stem-loop sequence GCUGGCAUGUGCGGCGGCUGUUGCGCGUGAUCGGCGGGGACGGCGCCGCCCGCAACAUUCGGGUGCGGAUGCCGUGGGCGCGAGGCCGGGGCUGGCAUGUGCGGCGGCUGUUGCGCGAGAUCGGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT036947.1
ncRNA:24   GGCGGCUAGAGCGCGUUGUCGGCG   1
  ||*|||=*||||||||||||||||
targets:51   CCACCGGCCUCGCGCAACAGCCGC   74

2.0 Zea mays full-length cDNA clone ZM_BFb0148H04 mRNA, complete cds NA coding protein psRNATarget