Search result

BaseInfo

ncRNA ID	novel_zma_miR13554
Species	Zea mays
Class	miRNA
Genome position	Chr10:69457688-69457805 [-]
Reference genome	RefGen_v4
Source	SRR1997866;SRR2089699
Length	24
Mature sequence(if miRNA)	1 - ACAGGACGGCACUCGGCAAAGACA - 24
Stem-loop(if miRNA)	--G                AU   U          - -             UUA    CUCG    CUUUGCCGAGUGUUGU  UCU UGCCGAGUGU C GCACUCGGUAAAG   GGCU    G    ||||||||||||||||  ||| |||||||||| | |||||||||||||   ||||    GAAACGGCUCACGGCA  GGA ACGGCUCACA G CGUGAGCCAUUUC   CCGA    C ACA                --   C          A U             --C    AAAA
Stem-loop sequence	GCUUUGCCGAGUGUUGUAUUCUUUGCCGAGUGUCGCACUCGGUAAAGUUAGGCUCUCGGCAAAAAGCCCCUUUACCGAGUGCUGAACACUCGGCACAGGACGGCACUCGGCAAAGACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI405862.1	ncRNA:24   ACAGAAACGGCUCACGGCAGGACA   1   ***|||||||||||||=||||||| targets:97   CCCCUUUGCCGAGUGCUGUCCUGU   120 Target Full Sequence	1.5	Sequence 3987 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237992.1	ncRNA:24   ACAGAAACGGCUCACGGCAGGACA   1   ***|||||||||||||=||||||| targets:97   CCCCUUUGCCGAGUGCUGUCCUGU   120 Target Full Sequence	1.5	Sequence 3987 from Patent EP2985353	NA	coding protein	psRNATarget
JB166323.1	ncRNA:24   ACAGAAACGGCUCACGGCAGGACA   1   ***|||||||||||||=||||||| targets:97   CCCCUUUGCCGAGUGCUGUCCUGU   120 Target Full Sequence	1.5	Sequence 3987 from Patent EP2559767	NA	coding protein	psRNATarget