ncRNA ID | novel_zma_miR13553 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:68454717-68454765 [-] |
Reference genome | RefGen_v4 |
Source | SRR5451006;SRR2089705 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCUCGUUUCUGUGGAGCCAGGCU - 24 |
Stem-loop(if miRNA) |
--CUA      -  U     -   CC      GGCUCC CA GAAAC AGA  U      |||||| || ||||| |||      CCGAGG GU CUUUG UCU  U UCGGA      U  -     C   AG |
Stem-loop sequence | CUAGGCUCCCAUGAAACAGACCUUGAUCUCGUUUCUGUGGAGCCAGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001322109.1 |
|
1.5 | Zea mays Dormancy-associated protein homolog 3 (LOC100192502), transcript variant 1, mRNA | NA | coding protein | psRNATarget | |||||||||
EU964946.1 |
|
1.5 | Zea mays clone 282725 auxin-repressed protein mRNA, complete cds | NA | coding protein | psRNATarget |