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BaseInfo

ncRNA ID	novel_zma_miR13548
Species	Zea mays
Class	miRNA
Genome position	Chr6:113667034-113667101 [-]
Reference genome	RefGen_v4
Source	SRR5451006
Length	24
Mature sequence(if miRNA)	45 - AUAGAUCAGAAAGAGGCCAGAGGC - 68
Stem-loop(if miRNA)	---AUA  U    AA     -  -    CC  ACCC       GA CAGA  GAGGC CA GAGG  CA    U       || ||||  ||||| || ||||  ||    A       CU GUCU  CUUUG GU CUCU  GU    U UUUGUG  -    -C     U  G    AU  CCUA
Stem-loop sequence	AUAGAUCAGAAAGAGGCCAGAGGCCCAACCCUAUAUCCUGUAUCUCGUGUGUUUCCUCUGUCGUGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU952095.1	ncRNA:24   CGGAGACCGGAGAAAGACUAGAUA   1   |||||||||||||||||||||||| targets:1657   GCCUCUGGCCUCUUUCUGAUCUAU   1680 Target Full Sequence	0.0	Zea mays clone 1164250 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU943108.1	ncRNA:24   CGGAGACCGGAGAAAGACUAGAUA   1   **=|||||**|||||||||||||| targets:128   AGUUCUGGAAUCUUUCUGAUCUAU   151 Target Full Sequence	2.0	Zea mays clone 1562172 mRNA sequence	NA	coding protein	psRNATarget
BT083671.1	ncRNA:24   CGGAGACCGGAGAAAGACUAGAUA   1   **=|||||**|||||||||||||| targets:963   AGUUCUGGAAUCUUUCUGAUCUAU   986 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0027A21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177081.1	ncRNA:24   CGGAGACCGGAGAAAGACUAGAUA   1   **=|||||**|||||||||||||| targets:963   AGUUCUGGAAUCUUUCUGAUCUAU   986 Target Full Sequence	2.0	Zea mays uncharacterized LOC100282169 (si496017h02), mRNA	NA	coding protein	psRNATarget
EU959887.1	ncRNA:24   CGGAGACCGGAGAAAGACUAGAUA   1   **=|||||**|||||||||||||| targets:960   AGUUCUGGAAUCUUUCUGAUCUAU   983 Target Full Sequence	2.0	Zea mays clone 220266 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020553345.1	ncRNA:24   CGGAGACCGGAGAAAGACUAGAUA   1   **=|||||**|||||||||||||| targets:998   AGUUCUGGAAUCUUUCUGAUCUAU   1021 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100282169 (si496017h02), transcript variant X1, mRNA	NA	coding protein	psRNATarget