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BaseInfo

ncRNA ID ath-miRf10143-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CUACUCGAGCUCGUGGUCGAGUGGU - NA
Stem-loop(if miRNA)    GA  -G  UU         G           AA     AGGG     -GA G -AUGU        A
GGC  UG  UG  GCUCGAUCA GGGCUCGAGUG  UGGCG    AUUGU   U G     GCUCGACC A
|||  ||  ||  ||||||||| |||||||||||  |||||    |||||   | |     ||||||||
CUG  AU  GU  UGAGCUGGU CUCGAGCUCAU  ACUGU    UGGCA   A U     UGAGCUGG U
   AG  AG  GG         G           CG     --AG     AAG G GGUGG        U
Stem-loop sequence GGCGAUGGUGUUGCUCGAUCAGGGGCUCGAGUGAAUGGCGAGGGAUUGUGAUGGAUGUGCUCGACCAAUUGGUCGAGUGGUGGUGAGAAACGGUGAUGUCAGCUACUCGAGCUCGUGGUCGAGUGGUGGAUAGAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:25   UGGUGAGCUGGUGCUCGAGCUCAUC   1
  ||||||||||||||||*||||||||
targets:1525   ACCACUCGACCACGAGGUCGAGUAG   1549

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget