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BaseInfo

ncRNA ID	novel_zma_miR13529
Species	Zea mays
Class	miRNA
Genome position	Chr5:163723027-163723100 [-]
Reference genome	RefGen_v4
Source	SRR5451006
Length	24
Mature sequence(if miRNA)	51 - AGGAUUAGAAGGGCUAAAAUUCAC - 74
Stem-loop(if miRNA)	--A     A  A   -         A           A    GGAUU GA GGG CUAAAAUUC CUUCUUAUUCA A    ||||| || ||| ||||||||| |||||||||||    CCUAA CU CCC GAUUUUAAG GAGGAAUAAGU A UCA     C  -   A         G           A
Stem-loop sequence	AGGAUUAGAAGGGCUAAAAUUCACUUCUUAUUCAAAAAUGAAUAAGGAGGGAAUUUUAGACCCUCCAAUCCACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008659946.2	ncRNA:24   CACUUAAAAUCGGGAAGAUUAGGA   1   |||=||||||||||*||||||||* targets:3553   GUGGAUUUUAGCCCCUCUAAUCCA   3576 Target Full Sequence	2.5	PREDICTED: Zea mays translocase of chloroplast 120, chloroplastic (LOC103637626), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008659944.2	ncRNA:24   CACUUAAAAUCGGGAAGAUUAGGA   1   |||=||||||||||*||||||||* targets:3544   GUGGAUUUUAGCCCCUCUAAUCCA   3567 Target Full Sequence	2.5	PREDICTED: Zea mays translocase of chloroplast 120, chloroplastic (LOC103637626), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI405820.1	ncRNA:24   CACUUAAAAUCGGGAAGAUUAGGA   1   |*|=||||||||||*||||||||* targets:194   GGGGAUUUUAGCCCCUCUAAUCCC   217 Target Full Sequence	2.5	Sequence 3945 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237950.1	ncRNA:24   CACUUAAAAUCGGGAAGAUUAGGA   1   |*|=||||||||||*||||||||* targets:194   GGGGAUUUUAGCCCCUCUAAUCCC   217 Target Full Sequence	2.5	Sequence 3945 from Patent EP2985353	NA	coding protein	psRNATarget
JB166281.1	ncRNA:24   CACUUAAAAUCGGGAAGAUUAGGA   1   |*|=||||||||||*||||||||* targets:194   GGGGAUUUUAGCCCCUCUAAUCCC   217 Target Full Sequence	2.5	Sequence 3945 from Patent EP2559767	NA	coding protein	psRNATarget