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BaseInfo

ncRNA ID novel_zma_miR13491
Species Zea mays
Class miRNA
Genome position Chr3:4913766-4913883 [-]
Reference genome RefGen_v4
Source SRR5451006
Length 22
Mature sequence(if miRNA) 97 - CCCUACUGUGAGCGGCCCGGAC - 118
Stem-loop(if miRNA) ---    ACU   A               CUGA     C     U  G   -    GGUCC
   CCCU   GUG GCGGCCCGGACCUCC    GGGGU CGGGA CC UCC CAGG     G
   ||||   ||| |||||||||||||||    ||||| ||||| || ||| ||||     G
   GGGA   UAC UGUCGGGCCUGGAGG    CUCCA GUUCU GG AGG GUCC     U
CUG    -CC   G               CCCG     A     -  -   U    AUGUU
Stem-loop sequence CCCUACUGUGAGCGGCCCGGACCUCCCUGAGGGGUCCGGGAUCCGUCCCAGGGGUCCGGUUUGUACCUGUGGAGGUCUUGAACCUCGCCCGGAGGUCCGGGCUGUGCAUCCAGGGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545234.1
ncRNA:22   CAGGCCCGGCGAGUGUCAUCCC   1
  ||||||||=*||||||||||||
targets:4273   GUCCGGGCUACUCACAGUAGGG   4294

2.5 PREDICTED: Zea mays ABC transporter I family member 1-like (LOC103642079), transcript variant X2, mRNA NA coding protein psRNATarget