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BaseInfo

ncRNA ID	osa-miRf10946-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UUUCGCUGAUGUGGCGCCUACGU - NA
Stem-loop(if miRNA)	-  AG A      C                     CAUCC  -  CAUCAAAUAAAUUAAAAACAAUA  GA  G CGGUUU GCUGAUGUGGCGCCUACGUGG     UA AU                       A  ||  | |||||| |||||||||||||||||||||     || ||  CU  C GCCAAA CGACUGCACCGCGGAUGCAUC     UC CC                       A C  CU -      A                     ----C  U  UCAGUGACUGUCCACCCGGGGUG
Stem-loop sequence	GAAGGACGGUUUCGCUGAUGUGGCGCCUACGUGGCAUCCUAAUCAUCAAAUAAAUUAAAAACAAUAAAGUGGGGCCCACCUGUCAGUGACUCCUCUCCUACGUAGGCGCCACGUCAGCAAAACCGCUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015793086.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |||||||||||||=||||||||| targets:191   ACGUAGGCGCCACGUCAGCGAAA   213 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group DEAD-box ATP-dependent RNA helicase 30 (LOC9271802), transcript variant X1, mRNA	DEAD-box ATP-dependent RNA helicase 30(LOC9271802)	coding protein	psRNATarget
AK288162.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |||||||||||||||||||*||| targets:2299   ACGUAGGCGCCACAUCAGCCAAA   2321 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090001P20, full insert sequence	NA	coding protein	psRNATarget
XM_015756867.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |||||||||||||||||||*||| targets:2851   ACGUAGGCGCCACAUCAGCCAAA   2873 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group lysine-specific demethylase JMJ25 (LOC4346966), transcript variant X6, mRNA	lysine-specific demethylase JMJ25(LOC4346966)	coding protein	psRNATarget
XM_015766827.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |=|||||||=||||||||=|||| targets:1830   AUGUAGGCGUCACAUCAGUGAAA   1852 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279878 (LOC107279878), transcript variant X1, mRNA	uncharacterized LOC107279878(LOC107279878)	coding protein	psRNATarget
XM_015766828.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |=|||||||=||||||||=|||| targets:1684   AUGUAGGCGUCACAUCAGUGAAA   1706 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279878 (LOC107279878), transcript variant X2, mRNA	uncharacterized LOC107279878(LOC107279878)	coding protein	psRNATarget
XM_015783543.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |||||||||||||||||||*||| targets:366   ACGUAGGCGCCACAUCAGCCAAA   388 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339505 (LOC4339505), transcript variant X1, mRNA	uncharacterized LOC4339505(LOC4339505)	coding protein	psRNATarget
XM_015783544.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |||||||||||||||||||*||| targets:360   ACGUAGGCGCCACAUCAGCCAAA   382 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339505 (LOC4339505), transcript variant X2, mRNA	uncharacterized LOC4339505(LOC4339505)	coding protein	psRNATarget
XM_015772169.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |||||||=|||||||||||*||| targets:582   ACGUAGGUGCCACAUCAGCUAAA   604 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group autophagy-related protein 18b (LOC4330978), mRNA	autophagy-related protein 18b(LOC4330978)	coding protein	psRNATarget
AK099697.1	ncRNA:23   UGCAUCCGCGGUGUAGUCGCUUU   1   |||||||=|||||||||||*||| targets:587   ACGUAGGUGCCACAUCAGCUAAA   609 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013074J03, full insert sequence	NA	coding protein	psRNATarget