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BaseInfo

ncRNA ID	novel_zma_miR13483
Species	Zea mays
Class	miRNA
Genome position	Chr3:170491961-170492009 [-]
Reference genome	RefGen_v4
Source	SRR5451006
Length	24
Mature sequence(if miRNA)	1 - AGCCGUCCACGUGGUGGAGUCGGG - 24
Stem-loop(if miRNA)	---UU     G        -     C      UUCUG CCACGUGG CGGCU U      ||||| |||||||| |||||      GAGGU GGUGCACC GCCGA A GGGCU     -        U     G
Stem-loop sequence	UUUUCUGGCCACGUGGCGGCUCUAGAGCCGUCCACGUGGUGGAGUCGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166438.1	ncRNA:24   GGGCUGAGGUGGUGCACCUGCCGA   1   |||*|||||||||||||||||||| targets:7   CCCUACUCCACCACGUGGACGGCU   30 Target Full Sequence	0.0	Sequence 4102 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238107.1	ncRNA:24   GGGCUGAGGUGGUGCACCUGCCGA   1   |||*|||||||||||||||||||| targets:7   CCCUACUCCACCACGUGGACGGCU   30 Target Full Sequence	0.0	Sequence 4102 from Patent EP2985353	NA	coding protein	psRNATarget
HI405977.1	ncRNA:24   GGGCUGAGGUGGUGCACCUGCCGA   1   |||*|||||||||||||||||||| targets:7   CCCUACUCCACCACGUGGACGGCU   30 Target Full Sequence	0.0	Sequence 4102 from Patent EP2074227	NA	coding protein	psRNATarget
EU963964.1	ncRNA:24   GGGCUGAGGUGGUGCACCUGCCGA   1   |||||||||=|||||||||||||* targets:224   CCCGACUCCGCCACGUGGACGGCC   247 Target Full Sequence	2.0	Zea mays clone 274604 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001323076.1	ncRNA:24   GGGC----UGAGGUGGUGCACCUGCCGA   1   =|||----=|||=||*|||||||||||| targets:819   UCCGCGGCGCUCUACAACGUGGACGGCU   846 Target Full Sequence	2.5	Zea mays arginine decarboxylase 1 (LOC103638134), mRNA	NA	coding protein	psRNATarget
XM_020545234.1	ncRNA:24   GGGCUGAGGUGGUGCACCUGCCGA   1   |*=|||*||||||||||||||*|| targets:4072   CAUGACCCCACCACGUGGACGACU   4095 Target Full Sequence	2.5	PREDICTED: Zea mays ABC transporter I family member 1-like (LOC103642079), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681832.2	ncRNA:24   GGGCUGAGGUGGUGCACCUGCCGA   1   =|=|*||=|*|||||||||||||* targets:1885   UCUGCCUUCUCCACGUGGACGGCA   1908 Target Full Sequence	3.0	PREDICTED: Zea mays scarecrow-like protein 9 (LOC103655011), mRNA	NA	coding protein	psRNATarget