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BaseInfo

ncRNA ID	novel_zma_miR13481
Species	Zea mays
Class	miRNA
Genome position	Chr3:209532548-209532589 [-]
Reference genome	RefGen_v4
Source	SRR5451006
Length	21
Mature sequence(if miRNA)	22 - CCGAGCUGGGAGAGGGGAGUC - 42
Stem-loop(if miRNA)	--C  A  UG G      G      CG GC  G AGAGGG AGU    || ||  | |||||| ||C    GC CG  C UCUCCU UCG GAA  -  GU G      G
Stem-loop sequence	CCGAGCUGGGAGAGGGGAGUCGCUGUCCUCUGCUGGCCGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020541542.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   |||||||||||||||||||*| targets:299   GACUCCCCUCUCCCAGCUCAG   319 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109941064 (LOC109941064), mRNA	NA	coding protein	psRNATarget
EU944771.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   |=||=||||||||||*||||| targets:521   GGCUUCCCUCUCCCAACUCGG   541 Target Full Sequence	2.5	Zea mays clone 229786 mRNA sequence	NA	coding protein	psRNATarget
XM_008654762.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   |=||=||||||||||*||||| targets:515   GGCUUCCCUCUCCCAACUCGG   535 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103633080), mRNA	NA	coding protein	psRNATarget
EU969261.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   **|||=||||||||=|||||| targets:4   UCCUCUCCUCUCCCGGCUCGG   24 Target Full Sequence	2.5	Zea mays clone 327708 dihydroflavonol-4-reductase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138687.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   **|||=||||||||=|||||| targets:4   UCCUCUCCUCUCCCGGCUCGG   24 Target Full Sequence	2.5	Zea mays dihydroflavonol-4-reductase (LOC100193580), mRNA	NA	coding protein	psRNATarget
BT018801.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   **|||=|||||||=||||||| targets:397   CUCUCUCCUCUCCUAGCUCGG   417 Target Full Sequence	2.5	Zea mays clone EL01N0529D02.d mRNA sequence	NA	coding protein	psRNATarget
XM_020544249.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   *=||||==||||||||||||* targets:391   UGCUCCUUUCUCCCAGCUCGC   411 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC109942331 (LOC109942331), mRNA	NA	coding protein	psRNATarget
BT066793.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   **||=||||||*||||||||| targets:489   CCCUUCCCUCUGCCAGCUCGG   509 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0067J13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175946.1	ncRNA:21   CUGAGGGGAGAGGGUCGAGCC   1   **||=||||||*||||||||| targets:489   CCCUUCCCUCUGCCAGCUCGG   509 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383286 (LOC100383286), mRNA	NA	coding protein	psRNATarget