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BaseInfo

ncRNA ID novel_zma_miR13473
Species Zea mays
Class miRNA
Genome position Chr2:183497550-183497604 [+]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 32 - UCGGACGGUCCGUGAUGGCGCAGA - 55
Stem-loop(if miRNA) --     A    -     G    UC   
  UGUGU CGUC CGGAU GUCC  GCCU
  ||||| |||| ||||| ||||  |||G
  ACGCG GUAG GCCUG CAGG  CGGG
AG     -    U     G    CU   
Stem-loop sequence UGUGUACGUCCGGAUGGUCCUCGCCUGGGGCUCGGACGGUCCGUGAUGGCGCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ052868.1
ncRNA:24   AGACGCGGUAGUGCCUGGCAGGCU   1
  **|*|||||||=||||||||||||
targets:486   CAUACGCCAUCGCGGACCGUCCGA   509

1.5 TSA: Zea mays contig53989, mRNA sequence NA coding protein psRNATarget